Research tools: Members of co-expression network centered on AtF3'H (TT7)* |
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Schematic of Arabidopsis flavonoid biosynthesis |
Gene/enzyme name | Gene abbreviation | locus | AGI identifier | |
| Flavonoid Biosynthetic Enzymes | |||||
| chalcone synthase | CHS | tt4 | AT5G13930 | ||
| chalcone isomerase | CHI | tt5 | AT3G55120 | ||
| chalcone isomerase like | CHI-like | AT5G05270 | |||
| flavanone 3-hydroxylase | F3H | tt6 | AT3G51240 | ||
| flavonoid 3'-hydroxylase | F3'H | tt7 | AT5G07990 | ||
| dihydroflavonol 4-reductase | DFR | tt3 | AT5G42800 | ||
| anthocyanidin synthase | ANS | tt18 | At4G22880 | ||
| anthocyanidin synthase-like | ANS-like | AT4G22870 | |||
| anthocyanidin reductase | ANR/BAN | banyuls | AT1G61720 | ||
| flavonol synthase 1 | FLS1 | fls1 | AT5G08640 | ||
| 4-coumarate:CoA ligase | At4CL3 | AT1G65060 | |||
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| MYB domain transcription factor - regulates anthocyanin metabolism | AtMYB75/ PAP1 |
AT1G56650 | |||
| transcription factor | TT8 | tt8 | AT4G09820 | ||
| WD40 repeat protein regulates transcription | TTG | ttg | AT5G24520 | ||
| MYB transcription factor | TT2/ATMYB123 | tt2 | AT5G35550 | ||
| Flavonoid Modification Enzymes | |||||
| flavonoid 3-O-glucosyltransferase | F3GT | anl1 | AT5G17050 | ||
| anthocyanin 5-O-glucosyltransferase | A5GT | AT4G14090 | |||
| UDP-glucose:flavonoid 3-O-glucosyltransferase | UF3GT | AT5G54060 | |||
| malonyl-CoA:anthocyanidin 5-O-glucoside-6'-O-malonyltransferase | 5MAT | AT3G29590 | |||
| flavonol-7-O-rhamnosyltransferase | F7RT | AT1G06000 | |||
| UDP-L-Rhamnose synthase | ROL1/RHM1 | AT1G78570 | |||
| caffeic acid/5-hydroxyferulic acid O-methyltransferase, flavonol 3’-methyltransferase | AtOMT1 | AT5G54160 | |||
| caffeoyl-CoA 3-O-methyltransferase | CCoAOMT1 | AT4G34050 | |||
| transferase family protein similar to anthocyanin acyltransferase | ACAT-like | AT1G03940 | |||
| UDP-glucoronosyl/UDP-glucosyl transferase family protein (UGT84A1) | UGT84A1 | AT4G15480 | |||
| Others | |||||
| glutathione S-transferase12 - involved in intracellular transport of flavonoids | AtGSTF12 | tt19 | AT5G17720 | ||
| serine carboxypeptidase-like | SCP-like | AT2G23000 | |||
| sugar transporter superfamily | ST-like | AT4G04750 | |||
| cinnamoyl-CoA reductase-related | CCR-like | AT2G23910 | |||
| enoyl-CoA hydratase/isomerase family protein | ECH-like | AT1G06550 | |||
| sugar transporter family protein; Identical to D-xylose-proton symporter-like 2 | XT-like | AT5G17010 | |||
| embryo-specific protein-related; similar to ATS3 | ATS3-like | AT5G62210 | |||
| acetyl CoA carboxylase | ACC1 | emb22/gurke | AT1G36160 | ||
| allyl alcohol dehydrogenase, putative; oxidoreductase | AAD-like | AT1G65560 | |||
| acetyl-CoA C-acyltransferase activity | KAT5/PKT1 | AT5G48880 | |||
NOTE: gene annotations have not been confirmed in many cases *J. Fetrow, B. Winkel, and G. Muday, unpublished data |
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